SCAF4 protein (Vulpes vulpes) - STRING interaction network

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Known Interactions

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Predicted Interactions

gene neighborhood

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textmining

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protein homology

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Score

SCAF4

Splicing factor, arginine/serine-rich 15. (1120 aa)

Predicted Functional Partners:

SETX

0.879

POLR2A

0.814

PCF11

0.724

NCBP2

0.676

MCM3AP

0.652

RNMT

0.647

RPRD2

0.637

EXOSC10

0.628

NCBP2L

0.617

NCBP1

0.612

Your Current Organism:

Vulpes vulpes

NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EXOSC10	NCBP1	ENSVVUP00000037951	ENSVVUP00000026836	Exosome component 10.	Nuclear cap-binding protein subunit 1 isoform X1.	0.450
EXOSC10	POLR2A	ENSVVUP00000037951	ENSVVUP00000039109	Exosome component 10.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.402
EXOSC10	SCAF4	ENSVVUP00000037951	ENSVVUP00000003760	Exosome component 10.	Splicing factor, arginine/serine-rich 15.	0.628
EXOSC10	SETX	ENSVVUP00000037951	ENSVVUP00000039837	Exosome component 10.	Probable helicase senataxin isoform X1.	0.545
MCM3AP	NCBP1	ENSVVUP00000032681	ENSVVUP00000026836	Germinal-center associated nuclear protein.	Nuclear cap-binding protein subunit 1 isoform X1.	0.458
MCM3AP	SCAF4	ENSVVUP00000032681	ENSVVUP00000003760	Germinal-center associated nuclear protein.	Splicing factor, arginine/serine-rich 15.	0.652
NCBP1	EXOSC10	ENSVVUP00000026836	ENSVVUP00000037951	Nuclear cap-binding protein subunit 1 isoform X1.	Exosome component 10.	0.450
NCBP1	MCM3AP	ENSVVUP00000026836	ENSVVUP00000032681	Nuclear cap-binding protein subunit 1 isoform X1.	Germinal-center associated nuclear protein.	0.458
NCBP1	NCBP2	ENSVVUP00000026836	ENSVVUP00000011667	Nuclear cap-binding protein subunit 1 isoform X1.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.999
NCBP1	NCBP2L	ENSVVUP00000026836	ENSVVUP00000013312	Nuclear cap-binding protein subunit 1 isoform X1.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.966
NCBP1	PCF11	ENSVVUP00000026836	ENSVVUP00000023835	Nuclear cap-binding protein subunit 1 isoform X1.	pre-mRNA cleavage complex 2 protein Pcf11 isoform X1.	0.738
NCBP1	POLR2A	ENSVVUP00000026836	ENSVVUP00000039109	Nuclear cap-binding protein subunit 1 isoform X1.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.656
NCBP1	RNMT	ENSVVUP00000026836	ENSVVUP00000019679	Nuclear cap-binding protein subunit 1 isoform X1.	mRNA cap guanine-N7 methyltransferase.	0.727
NCBP1	SCAF4	ENSVVUP00000026836	ENSVVUP00000003760	Nuclear cap-binding protein subunit 1 isoform X1.	Splicing factor, arginine/serine-rich 15.	0.612
NCBP1	SETX	ENSVVUP00000026836	ENSVVUP00000039837	Nuclear cap-binding protein subunit 1 isoform X1.	Probable helicase senataxin isoform X1.	0.425
NCBP2	NCBP1	ENSVVUP00000011667	ENSVVUP00000026836	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Nuclear cap-binding protein subunit 1 isoform X1.	0.999
NCBP2	PCF11	ENSVVUP00000011667	ENSVVUP00000023835	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	pre-mRNA cleavage complex 2 protein Pcf11 isoform X1.	0.644
NCBP2	POLR2A	ENSVVUP00000011667	ENSVVUP00000039109	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.618
NCBP2	RNMT	ENSVVUP00000011667	ENSVVUP00000019679	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	mRNA cap guanine-N7 methyltransferase.	0.639
NCBP2	SCAF4	ENSVVUP00000011667	ENSVVUP00000003760	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Splicing factor, arginine/serine-rich 15.	0.676