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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPNE4Copine-4. (578 aa)    
Predicted Functional Partners:
SLC2A13
Proton myo-inositol cotransporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
   
  
 0.526
TMEM117
Transmembrane protein 117.
      
 0.523
KBTBD12
Kelch repeat and BTB domain-containing protein 12.
   
  
 0.522
TMEM161B
Transmembrane protein 161B isoform X1.
      
 0.518
CWC22
pre-mRNA-splicing factor CWC22 homolog isoform X1.
      
 0.516
NAALADL2
Inactive N-acetylated-alpha-linked acidic dipeptidase-like protein 2 isoform X2.
     
 0.498
RNASEH2B
Ribonuclease H2 subunit B.
   
 
 0.479
FIGN
Fidgetin; Belongs to the AAA ATPase family.
     
 0.473
UTS2B
urotensin-2B.
      
 0.450
BCO2
Beta,beta-carotene 9',10'-oxygenase.
     
 0.448
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.