Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
FAM8A1Protein FAM8A1. (163 aa)    
Predicted Functional Partners:
SYVN1
E3 ubiquitin-protein ligase synoviolin isoform X4.
    
 
 0.932
SEL1L
Protein sel-1 homolog 1.
    
 
 0.893
OS9
Protein OS-9 isoform X2.
    
 
 0.864
ERLEC1
Endoplasmic reticulum lectin 1 isoform X2.
    
 
 0.808
SEL1L2
Protein sel-1 homolog 2.
    
 
 0.773
AMFR
E3 ubiquitin-protein ligase AMFR.
    
 
 0.737
FAM136A
Protein FAM136A.
      
 0.707
FRA10AC1
Protein FRA10AC1.
      
 0.706
PITHD1
PITH domain-containing protein 1.
      
 0.702
THAP1
E3 ubiquitin-protein ligase RNF170 isoform X1.
      
 0.634
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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