close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXB3Homeobox protein Hox-B3. (419 aa)    
Predicted Functional Partners:
HOXB4
Homeobox protein Hox-B4.
   
  
 0.804
HOXB5
Homeobox protein Hox-B5.
   
  
0.687
HOXB6
Homeobox protein Hox-B6.
   
  
0.664
HOXB7
Homeobox protein Hox-B7.
   
  
0.570
HOXB8
Homeobox protein Hox-B8.
   
  
0.557
HOXB2
Homeobox protein Hox-B2.
   
  
0.535
FOXF1
Forkhead box protein F1.
    
 0.465
SMIM15
Small integral membrane protein 15.
      
 0.459
LOC112907523
Small integral membrane protein 15-like.
      
 0.459
ARID4A
AT-rich interactive domain-containing protein 4A isoform X1.
      
 0.455
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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