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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112912885Transmembrane protein 59-like. (227 aa)    
Predicted Functional Partners:
GAK
cyclin-G-associated kinase isoform X3.
    
 0.841
STIP1
Stress-induced-phosphoprotein 1.
   
 0.747
CLPB
Caseinolytic peptidase B protein homolog isoform X1.
  
 
 0.700
DNAJC6
Putative tyrosine-protein phosphatase auxilin isoform X1.
    
 0.685
DNAJC2
dnaJ homolog subfamily C member 2 isoform X1.
   
 0.685
DNAJC10
DnaJ homolog subfamily C member 10; Endoplasmic reticulum disulfide reductase involved both in the correct folding of proteins and degradation of misfolded proteins.
  
 0.667
BAG3
BAG family molecular chaperone regulator 3.
   
 0.653
ENSVVUP00000012674
annotation not available
   
 0.620
TRAP1
Heat shock protein 75 kDa, mitochondrial.
   
 0.620
ENSVVUP00000026430
annotation not available
   
 0.620
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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