Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MTX1Metaxin. (317 aa)    
Predicted Functional Partners:
MTX3
Metaxin.
  
  
0.950
SAMM50
Sorting and assembly machinery component 50 homolog.
   
 0.947
LOC112916377
Metaxin-2-like.
   
 0.944
ENSVVUP00000019465
annotation not available
   
 0.944
MAP1LC3C
Microtubule-associated proteins 1A/1B light chain 3C.
   
 0.911
GABARAPL2
Gamma-aminobutyric acid receptor-associated protein-like 2.
   
 0.907
TOMM20
Mitochondrial import receptor subunit TOM20 homolog.
    
 0.863
TOMM7
Mitochondrial import receptor subunit TOM7 homolog.
    
 0.862
DNAJC11
dnaJ homolog subfamily C member 11 isoform X1.
    
 0.858
TOMM40
Mitochondrial import receptor subunit TOM40 homolog.
   
 0.824
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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