ENSVVUP00000004946 protein (Vulpes vulpes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSVVUP00000004946

annotation not available (74 aa)

Predicted Functional Partners:

LMAN2L

0.587

RNF135

0.467

RNF181

0.447

RNASEH2A

0.440

MARVELD1

0.437

PGP

0.431

PRIM1

0.404

Your Current Organism:

Vulpes vulpes

NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSVVUP00000004946	LMAN2L	ENSVVUP00000004946	ENSVVUP00000000036	annotation not available	VIP36-like protein isoform X2.	0.587
ENSVVUP00000004946	MARVELD1	ENSVVUP00000004946	ENSVVUP00000032025	annotation not available	MARVEL domain-containing protein 1.	0.437
ENSVVUP00000004946	PGP	ENSVVUP00000004946	ENSVVUP00000012680	annotation not available	Glycerol-3-phosphate phosphatase; Belongs to the HAD-like hydrolase superfamily.	0.431
ENSVVUP00000004946	PRIM1	ENSVVUP00000004946	ENSVVUP00000028469	annotation not available	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	0.404
ENSVVUP00000004946	RNASEH2A	ENSVVUP00000004946	ENSVVUP00000033344	annotation not available	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	0.440
ENSVVUP00000004946	RNF135	ENSVVUP00000004946	ENSVVUP00000028260	annotation not available	E3 ubiquitin-protein ligase RNF135 isoform X2.	0.467
ENSVVUP00000004946	RNF181	ENSVVUP00000004946	ENSVVUP00000002103	annotation not available	E3 ubiquitin-protein ligase RNF181 isoform X1.	0.447
LMAN2L	ENSVVUP00000004946	ENSVVUP00000000036	ENSVVUP00000004946	VIP36-like protein isoform X2.	annotation not available	0.587
LMAN2L	RNF135	ENSVVUP00000000036	ENSVVUP00000028260	VIP36-like protein isoform X2.	E3 ubiquitin-protein ligase RNF135 isoform X2.	0.819
MARVELD1	ENSVVUP00000004946	ENSVVUP00000032025	ENSVVUP00000004946	MARVEL domain-containing protein 1.	annotation not available	0.437
PGP	ENSVVUP00000004946	ENSVVUP00000012680	ENSVVUP00000004946	Glycerol-3-phosphate phosphatase; Belongs to the HAD-like hydrolase superfamily.	annotation not available	0.431
PRIM1	ENSVVUP00000004946	ENSVVUP00000028469	ENSVVUP00000004946	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	annotation not available	0.404
PRIM1	RNASEH2A	ENSVVUP00000028469	ENSVVUP00000033344	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	0.880
RNASEH2A	ENSVVUP00000004946	ENSVVUP00000033344	ENSVVUP00000004946	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	annotation not available	0.440
RNASEH2A	PRIM1	ENSVVUP00000033344	ENSVVUP00000028469	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	0.880
RNF135	ENSVVUP00000004946	ENSVVUP00000028260	ENSVVUP00000004946	E3 ubiquitin-protein ligase RNF135 isoform X2.	annotation not available	0.467
RNF135	LMAN2L	ENSVVUP00000028260	ENSVVUP00000000036	E3 ubiquitin-protein ligase RNF135 isoform X2.	VIP36-like protein isoform X2.	0.819
RNF181	ENSVVUP00000004946	ENSVVUP00000002103	ENSVVUP00000004946	E3 ubiquitin-protein ligase RNF181 isoform X1.	annotation not available	0.447