ASH1L protein (Vulpes vulpes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ASH1L

Histone-lysine N-methyltransferase ASH1L isoform X2. (2965 aa)

Predicted Functional Partners:

MORF4L1

0.981

USP34

0.863

SETD2

0.860

ZC3H11A

0.806

MORF4L2

0.770

PKP3

0.768

BPTF

0.766

ARID4B

0.764

MED13L

0.708

NIPBL

0.707

Your Current Organism:

Vulpes vulpes

NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARID4B	ASH1L	ENSVVUP00000012273	ENSVVUP00000005181	LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 4B.	Histone-lysine N-methyltransferase ASH1L isoform X2.	0.764
ARID4B	BPTF	ENSVVUP00000012273	ENSVVUP00000008445	LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 4B.	Nucleosome-remodeling factor subunit BPTF isoform X2.	0.645
ARID4B	NIPBL	ENSVVUP00000012273	ENSVVUP00000014264	LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 4B.	Nipped-B protein.	0.705
ARID4B	SETD2	ENSVVUP00000012273	ENSVVUP00000004485	LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 4B.	Histone-lysine N-methyltransferase SETD2.	0.630
ARID4B	USP34	ENSVVUP00000012273	ENSVVUP00000016291	LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 4B.	LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 34; Belongs to the peptidase C19 family.	0.502
ARID4B	ZC3H11A	ENSVVUP00000012273	ENSVVUP00000020370	LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 4B.	Zinc finger CCCH domain-containing protein 11A.	0.404
ASH1L	ARID4B	ENSVVUP00000005181	ENSVVUP00000012273	Histone-lysine N-methyltransferase ASH1L isoform X2.	LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 4B.	0.764
ASH1L	BPTF	ENSVVUP00000005181	ENSVVUP00000008445	Histone-lysine N-methyltransferase ASH1L isoform X2.	Nucleosome-remodeling factor subunit BPTF isoform X2.	0.766
ASH1L	MED13L	ENSVVUP00000005181	ENSVVUP00000017443	Histone-lysine N-methyltransferase ASH1L isoform X2.	Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.708
ASH1L	MORF4L1	ENSVVUP00000005181	ENSVVUP00000005134	Histone-lysine N-methyltransferase ASH1L isoform X2.	Mortality factor 4-like protein 1.	0.981
ASH1L	MORF4L2	ENSVVUP00000005181	ENSVVUP00000001858	Histone-lysine N-methyltransferase ASH1L isoform X2.	Mortality factor 4-like protein 2.	0.770
ASH1L	NIPBL	ENSVVUP00000005181	ENSVVUP00000014264	Histone-lysine N-methyltransferase ASH1L isoform X2.	Nipped-B protein.	0.707
ASH1L	PKP3	ENSVVUP00000005181	ENSVVUP00000023252	Histone-lysine N-methyltransferase ASH1L isoform X2.	Plakophilin-3.	0.768
ASH1L	SETD2	ENSVVUP00000005181	ENSVVUP00000004485	Histone-lysine N-methyltransferase ASH1L isoform X2.	Histone-lysine N-methyltransferase SETD2.	0.860
ASH1L	USP34	ENSVVUP00000005181	ENSVVUP00000016291	Histone-lysine N-methyltransferase ASH1L isoform X2.	LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 34; Belongs to the peptidase C19 family.	0.863
ASH1L	ZC3H11A	ENSVVUP00000005181	ENSVVUP00000020370	Histone-lysine N-methyltransferase ASH1L isoform X2.	Zinc finger CCCH domain-containing protein 11A.	0.806
BPTF	ARID4B	ENSVVUP00000008445	ENSVVUP00000012273	Nucleosome-remodeling factor subunit BPTF isoform X2.	LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 4B.	0.645
BPTF	ASH1L	ENSVVUP00000008445	ENSVVUP00000005181	Nucleosome-remodeling factor subunit BPTF isoform X2.	Histone-lysine N-methyltransferase ASH1L isoform X2.	0.766
BPTF	NIPBL	ENSVVUP00000008445	ENSVVUP00000014264	Nucleosome-remodeling factor subunit BPTF isoform X2.	Nipped-B protein.	0.846
BPTF	SETD2	ENSVVUP00000008445	ENSVVUP00000004485	Nucleosome-remodeling factor subunit BPTF isoform X2.	Histone-lysine N-methyltransferase SETD2.	0.806