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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCTD9BTB/POZ domain-containing protein KCTD9. (409 aa)    
Predicted Functional Partners:
TMEM159
Promethin.
      
 0.865
LOC112925678
Uncharacterized protein LOC112925678.
      
 0.765
SLC30A9
Zinc transporter 9.
      
 0.745
CUL3
Cullin-3 isoform X1; Belongs to the cullin family.
    
 
 0.648
TMEM144
Transmembrane protein 144.
      
 0.637
CRIM1
Cysteine-rich motor neuron 1 protein.
      
 0.622
TRA2B
Transformer-2 protein homolog beta isoform X1.
      
 0.607
LZIC
LOW QUALITY PROTEIN: protein LZIC.
      
 0.607
TOP2A
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.
   
 
 0.593
TOP2B
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.
   
 
 0.593
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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