close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUS1tRNA pseudouridine synthase A. (436 aa)    
Predicted Functional Partners:
WDR4
tRNA (Guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4.
   
 
 0.895
TRUB2
Mitochondrial mRNA pseudouridine synthase TRUB2.
   
 0.845
TRUB1
Probable tRNA pseudouridine synthase 1.
   
 0.793
PUS7
Pseudouridylate synthase 7 homolog isoform X2.
   
 
 0.790
PUS7L
Pseudouridylate synthase 7 homolog-like protein.
   
 
 0.774
RPUSD4
Mitochondrial RNA pseudouridine synthase RPUSD4.
  
  
 0.758
RPUSD3
Mitochondrial mRNA pseudouridine synthase RPUSD3 isoform X1.
  
  
 0.758
MRPL17
39S ribosomal protein L17, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
  
  
 0.750
METTL1
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.
  
 
 0.747
DUS3L
tRNA-dihydrouridine(47) synthase [NAD(P)(+)].
  
 
 0.735
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
Server load: low (40%) [HD]