Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TXLNBBeta-taxilin. (688 aa)    
Predicted Functional Partners:
TXLNA
Alpha-taxilin.
    
   0.875
TMEM236
Transmembrane protein 236.
      
 0.700
PRPF6
pre-mRNA-processing factor 6.
      
 0.683
RNF122
RING finger protein 122.
      
 0.667
STX4
Syntaxin-4; Belongs to the syntaxin family.
    
 0.661
STX3
Syntaxin-3.
    
 0.660
DTNBP1
Dysbindin.
    
   0.636
STX1A
syntaxin-1A; Belongs to the syntaxin family.
    
 0.605
STX1B
syntaxin-1B; Belongs to the syntaxin family.
    
 0.605
IGSF5
Immunoglobulin superfamily member 5.
      
 0.604
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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