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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC12Coiled-coil domain-containing protein 12. (166 aa)    
Predicted Functional Partners:
CDC40
pre-mRNA-processing factor 17.
    
  0.995
PRPF19
pre-mRNA-processing factor 19.
    
   0.957
CDC5L
Cell division cycle 5-like protein.
    
   0.953
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component.
    
   0.943
TCERG1
Transcription elongation regulator 1 isoform X1.
    
  0.940
SRRM1
LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1.
     
 0.931
PPIL1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.929
CRNKL1
Crooked neck-like protein 1.
    
   0.925
WDR25
WD repeat-containing protein 25.
    
  0.921
CWC27
Spliceosome-associated protein CWC27 homolog.
   
 0.919
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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