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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MANSC1MANSC domain-containing protein 1. (484 aa)    
Predicted Functional Partners:
SUSD6
Sushi domain-containing protein 6.
    
 0.565
CLSTN3
Calsyntenin-3.
    
 
 0.553
DHX34
Probable ATP-dependent RNA helicase DHX34.
   
 0.546
SYNM
Synemin; Belongs to the intermediate filament family.
  
  0.532
PPFIBP1
Liprin-beta-1 isoform X8.
   
 
 0.532
PLPPR2
Phospholipid phosphatase-related protein type 2 isoform X4.
    
 
 0.530
C3orf62
Uncharacterized protein C3orf62 homolog isoform X1.
      
 0.526
TSEN34
tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...]
   
  
 0.524
NADK
NAD kinase isoform X1.
     
 0.518
CDK15
Cyclin-dependent kinase 15; Belongs to the protein kinase superfamily.
   
 0.512
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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