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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPIFB6BPI fold-containing family B member 6. (426 aa)    
Predicted Functional Partners:
CIB4
Calcium and integrin-binding family member 4.
      
 0.698
BPIFA2
BPI fold-containing family A member 2.
   
 
 0.632
BPIFA1
BPI fold-containing family A member 1.
   
 
 0.620
BPIFB1
BPI fold-containing family B member 1.
     
 0.613
BPIFB2
BPI fold-containing family B member 2.
     
 0.559
BPIFA3
BPI fold-containing family A member 3.
      
 0.554
LOC112928161
Vomeromodulin-like.
      
 0.503
TTLL9
Probable tubulin polyglutamylase TTLL9.
    
 
 0.465
CCM2L
Cerebral cavernous malformations 2 protein-like.
      
 0.463
HINT2
Histidine triad nucleotide-binding protein 2, mitochondrial.
      
 0.461
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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