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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRPPRCLeucine-rich PPR motif-containing protein, mitochondrial. (1397 aa)    
Predicted Functional Partners:
SLIRP
SRA stem-loop-interacting RNA-binding protein, mitochondrial.
   
 
 0.963
MRPS22
28S ribosomal protein S22, mitochondrial.
   
  
 0.742
MRPL45
39S ribosomal protein L45, mitochondrial.
      
 0.694
GFM1
Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of mito [...]
   
  
 0.679
PTCD3
Pentatricopeptide repeat domain-containing protein 3, mitochondrial isoform X1.
   
  
 0.673
SART3
Squamous cell carcinoma antigen recognized by T-cells 3 isoform X2.
    
 
 0.630
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X2.
   
 
 0.620
MPV17L2
Mpv17-like protein 2 isoform X1; Belongs to the peroxisomal membrane protein PXMP2/4 family.
      
 0.607
MRPS18B
28S ribosomal protein S18b, mitochondrial.
      
 0.607
MBNL3
Muscleblind-like protein 3 isoform X2.
      
 0.604
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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