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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MINDY3Ubiquitin carboxyl-terminal hydrolase MINDY-3 isoform X1. (445 aa)    
Predicted Functional Partners:
ZNF428
Zinc finger protein 428.
      
 0.607
ZUP1
Ubiquitin carboxyl-terminal hydrolase ZUFSP isoform X2.
      
 0.607
CCDC97
Coiled-coil domain-containing protein 97.
      
 0.605
CLUAP1
Clusterin-associated protein 1 isoform X1.
      
 0.605
CHAC2
Gamma-glutamylcyclotransferase; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
      
 0.603
GORASP1
Golgi reassembly-stacking protein 1.
      
 0.520
NFU1
NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform X1.
      
 0.520
AAMP
Angio-associated migratory cell protein isoform X2.
      
 0.519
LOC112914885
RWD domain-containing protein 1.
      
 0.510
ENSVVUP00000022803
annotation not available
      
 0.510
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.