Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM52BTransmembrane protein 52B isoform X1. (221 aa)    
Predicted Functional Partners:
LOC112914774
Phosphatidylinositol 3-kinase regulatory subunit gamma isoform X1.
    
   0.624
PLA2G4E
Phospholipase A2.
      
 0.547
OLR1
Oxidized low-density lipoprotein receptor 1.
   
  
 0.478
PDZK1
Na(+)/H(+) exchange regulatory cofactor NHE-RF3 isoform X2.
      
 0.471
TMEM174
Transmembrane protein 174.
   
  
 0.458
SLC12A1
Solute carrier family 12 member 1 isoform X2.
   
  
 0.432
RBP5
Retinol-binding protein 5; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
      
 0.414
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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