Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PCMT1Protein-L-isoaspartate O-methyltransferase. (286 aa)    
Predicted Functional Partners:
DHX15
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
   
   0.771
TTC7B
Tetratricopeptide repeat protein 7B isoform X2.
      
 0.767
BORCS5
BLOC-1-related complex subunit 5 isoform X1.
      
 0.711
RAN
GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
  
 0.693
PFDN4
Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family.
   
  
 0.686
RPIA
Ribose-5-phosphate isomerase.
   
   0.658
TMEM183A
Transmembrane protein 183A isoform X1.
      
 0.623
TMBIM6
Bax inhibitor 1; Belongs to the BI1 family.
      
 0.623
SRBD1
S1 RNA-binding domain-containing protein 1 isoform X1.
      
 0.609
UHRF1
E3 ubiquitin-protein ligase UHRF1.
      
 0.603
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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