Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HPCAL4Hippocalcin-like protein 4 isoform X1. (232 aa)    
Predicted Functional Partners:
FAM131C
Protein FAM131C.
    
   0.624
RTN1
Reticulon.
   
  
 0.587
LRCH1
Leucine-rich repeat and calponin homology domain-containing protein 1 isoform X2.
    
 0.569
PI4KB
Phosphatidylinositol 4-kinase beta isoform X4; Belongs to the PI3/PI4-kinase family.
    
 
 0.556
CFAP299
Uncharacterized protein C4orf22 homolog isoform X2.
    
 0.542
MAPT
Microtubule-associated protein.
   
 
 0.514
CASK
Peripheral plasma membrane protein CASK isoform X5; Belongs to the MAGUK family.
    
 0.499
MANF
LOW QUALITY PROTEIN: mesencephalic astrocyte-derived neurotrophic factor.
     
 0.495
CALN1
Calcium-binding protein 8.
    
 0.492
WDR82
WD repeat-containing protein 82.
    
 
 0.483
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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