Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZMAT1Zinc finger matrin-type protein 1 isoform X1. (718 aa)    
Predicted Functional Partners:
ENSVVUP00000032162
annotation not available
      
 0.618
ARID4A
AT-rich interactive domain-containing protein 4A isoform X1.
      
 0.488
PTPRA
Receptor-type tyrosine-protein phosphatase alpha.
      
 0.478
ITFG1
T-cell immunomodulatory protein isoform X1.
      
 0.475
VSX1
Visual system homeobox 1.
      
 0.463
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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