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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IPO11Importin-11 isoform X1. (943 aa)    
Predicted Functional Partners:
IPO4
Importin-4.
   
  
 0.813
MRTO4
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
    
 
 0.734
TMEM116
Transmembrane protein 116 isoform X2.
    
 
 0.640
XPO6
Exportin-6 isoform X1.
   
 
 0.630
IPO5
Importin-5.
   
  
 0.620
CWC27
Spliceosome-associated protein CWC27 homolog.
      
 0.607
SPOP
Speckle-type POZ protein.
      
 0.605
IPO13
Importin-13 isoform X1.
      
 0.605
HTR1E
5-hydroxytryptamine receptor 1E.
     
 0.604
RANBP17
Ran-binding protein 17.
      
 0.603
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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