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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TLK2Serine/threonine-protein kinase tousled-like 2 isoform X1. (796 aa)    
Predicted Functional Partners:
ASF1A
Histone chaperone ASF1A.
    
 
 0.937
TLK1
Serine/threonine-protein kinase tousled-like 1 isoform X1.
  
  
0.933
LOC112923255-2
LOW QUALITY PROTEIN: histone chaperone ASF1B-like.
    
 
 0.817
CABIN1
Calcineurin-binding protein cabin-1 isoform X1.
    
 
 0.681
LOC112923255
Histone chaperone ASF1B-like.
    
 
 0.661
DHX16
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16.
   
 
 0.630
TMEM183A
Transmembrane protein 183A isoform X1.
      
 0.607
ZKSCAN5
Zinc finger protein with KRAB and SCAN domains 5 isoform X1.
      
 0.606
CUL3
Cullin-3 isoform X1; Belongs to the cullin family.
   
  
 0.579
ARIH1
RBR-type E3 ubiquitin transferase.
   
  
 0.569
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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