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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSPT2Eukaryotic peptide chain release factor GTP-binding subunit ERF3B. (611 aa)    
Predicted Functional Partners:
ETF1
Eukaryotic peptide chain release factor subunit 1.
   
 0.997
GSPT1
Eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1.
  
  
0.936
SMG1
Serine/threonine-protein kinase SMG1 isoform X1; Belongs to the PI3/PI4-kinase family.
    
 
 0.901
PAPSS2
Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2.
 
  
   0.861
ENSVVUP00000010066
annotation not available
    
 0.858
ENSVVUP00000017341
annotation not available
    
 0.858
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.858
UPF1
Regulator of nonsense transcripts 1 isoform X2.
    
 0.836
ABCE1
ATP-binding cassette sub-family E member 1.
   
 
 0.834
PAPSS1
Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 isoform X1.
 
  
   0.833
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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