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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC7ATetratricopeptide repeat protein 7A isoform X1. (861 aa)    
Predicted Functional Partners:
PI4KA
Phosphatidylinositol 4-kinase alpha; Belongs to the PI3/PI4-kinase family.
    
 
 0.904
EFR3B
Protein EFR3 homolog B.
   
 
 0.868
FAM126A
Hyccin isoform X1.
    
 
 0.865
EFR3A
Protein EFR3 homolog A.
   
 
 0.855
FAM126B
Protein FAM126B isoform X1.
    
 
 0.757
ZNF513
Zinc finger protein 513.
    
 
 0.714
LYPD6
ly6/PLAUR domain-containing protein 6.
      
 0.607
TTC37
Tetratricopeptide repeat protein 37.
      
 0.607
SKIV2L
Helicase SKI2W.
      
 0.603
TBC1D10C
Carabin.
      
 0.534
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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