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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112913615Transcription factor BTF3 homolog 4-like. (155 aa)    
Predicted Functional Partners:
LOC112913585
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 
 0.778
RPL10
60S ribosomal protein L10 isoform X2.
   
 
 0.755
ENSVVUP00000025059
annotation not available
   
 
 0.730
LOC112922369-2
Nascent polypeptide-associated complex subunit alpha isoform X1.
   
 
 0.730
LOC112922369
Nascent polypeptide-associated complex subunit alpha, muscle-specific form-like.
   
 
 0.730
ENSVVUP00000041276
annotation not available
   
 
 0.730
RPL19
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
   0.725
NACAD
NAC-alpha domain-containing protein 1.
   
 
 0.712
RPL5
60S ribosomal protein L5.
   
 
 0.702
RPL14
60S ribosomal protein L14.
   
 
 0.676
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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