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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPATCH4G patch domain-containing protein 4. (450 aa)    
Predicted Functional Partners:
WDR46
WD repeat-containing protein 46.
   
   0.781
BYSL
Bystin.
   
   0.735
NOM1
Nucleolar MIF4G domain-containing protein 1 isoform X2.
   
   0.697
EIF4A3
Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family.
   
 
 0.692
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.680
MAK16
Protein MAK16 homolog; Belongs to the MAK16 family.
   
   0.637
DQX1
ATP-dependent RNA helicase DQX1.
   
 
 0.621
DHX32
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 isoform X1.
   
 
 0.621
DHX15
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
   
 
 0.621
FBLL1
rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1.
   
   0.613
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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