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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC61A2Protein transport protein SEC61 subunit alpha. (234 aa)    
Predicted Functional Partners:
SEC61G
Protein transport protein Sec61 subunit gamma.
   
 0.997
RPL5
60S ribosomal protein L5.
  
 
 0.992
SEC63
Translocation protein SEC63 homolog.
   
 
 0.991
SEC61B
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
   
 0.990
RPL3
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 
 0.984
RPL10
60S ribosomal protein L10 isoform X2.
  
 
 0.983
RPL23
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.953
ENSVVUP00000012479
annotation not available
  
 
 0.953
ENSVVUP00000025385
annotation not available
  
 
 0.952
RPL11
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.952
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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