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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUGCTSuccinate--hydroxymethylglutarate CoA-transferase. (385 aa)    
Predicted Functional Partners:
GCDH
glutaryl-CoA dehydrogenase, mitochondrial.
 
 
 0.881
HSDL2
Hydroxysteroid dehydrogenase-like protein 2.
  
 0.830
LOC112929575
Hydroxysteroid dehydrogenase-like protein 2.
  
 0.830
IYD
Iodotyrosine deiodinase 1.
   
 
 0.760
SDHA
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
 
 0.745
LOC112925517
Nuclear body protein SP140-like protein isoform X3.
      
 0.731
SDHB
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
     
 0.728
RFK
Riboflavin kinase.
   
 
  0.727
SCP2
Non-specific lipid-transfer protein isoform X1; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.705
HACL1
2-hydroxyacyl-CoA lyase 1 isoform X1; Belongs to the TPP enzyme family.
  
 
 0.683
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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