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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECHDC3enoyl-CoA hydratase domain-containing protein 3, mitochondrial. (281 aa)    
Predicted Functional Partners:
PROSER2
Proline and serine-rich protein 2.
      
 0.603
NUDT5
ADP-sugar pyrophosphatase isoform X1; Belongs to the Nudix hydrolase family.
   
  
 0.526
SLC5A12
Sodium-coupled monocarboxylate transporter 2; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      
 0.515
CENPV
Centromere protein V.
      
 0.513
CDC123
Cell division cycle protein 123 homolog; Required for S phase entry of the cell cycle. Belongs to the CDC123 family.
      
 0.499
GNPDA1
Glucosamine-6-phosphate isomerase.
      
 0.499
DHTKD1
Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial.
      
 0.497
CELF2
CUGBP Elav-like family member 2 isoform X4.
      
 0.497
PECR
Peroxisomal trans-2-enoyl-CoA reductase.
   
  
 0.462
ENSVVUP00000029852
annotation not available
   
  
 0.462
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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