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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112920713Tropomyosin alpha-4 chain; Belongs to the tropomyosin family. (333 aa)    
Predicted Functional Partners:
MYH6
Myosin-6; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.779
MYH7
Myosin-7; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.779
MYL1
Myosin light chain 1/3, skeletal muscle isoform isoform X2.
   
 0.768
TNNT3
Troponin T, fast skeletal muscle isoform X5.
   
 0.705
TNNI2
Troponin I, fast skeletal muscle.
   
 0.704
TNNI1
Troponin I, slow skeletal muscle.
   
 0.699
TNNT2
Troponin T, cardiac muscle isoform X2.
   
 0.674
TNNT1
Troponin T, slow skeletal muscle.
   
 0.674
ACTA1
Actin alpha 1, skeletal muscle.
   
 0.668
ACTA2
Actin, aortic smooth muscle.
   
 0.668
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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