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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BEND5-2BEN domain-containing protein 5 isoform X2. (310 aa)    
Predicted Functional Partners:
RABAC1
PRA1 family protein.
      
 0.534
LPCAT3
Lysophospholipid acyltransferase 5; Belongs to the membrane-bound acyltransferase family.
   
  
 0.518
CEP63
Centrosomal protein of 63 kDa isoform X1.
      
 0.516
SUPT16H
FACT complex subunit SPT16.
      
 0.515
TTLL4
Tubulin polyglutamylase TTLL4.
   
 
 0.492
DPP9
Dipeptidyl peptidase 9 isoform X1; Belongs to the peptidase S9B family.
      
 0.461
ENSVVUP00000024816
annotation not available
     
 0.458
LOC112916044
Synaptotagmin-17-like.
      
 0.456
SYT17
Synaptotagmin-17.
      
 0.456
FUBP3
Far upstream element-binding protein 3 isoform X3.
      
 0.451
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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