Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
TNRC18Trinucleotide repeat-containing gene 18 protein. (2529 aa)    
Predicted Functional Partners:
SINHCAF
SIN3-HDAC complex-associated factor isoform X2.
    
   0.769
ING2
Inhibitor of growth protein.
    
 
 0.763
SAP30L
Histone deacetylase complex subunit SAP30L.
    
   0.553
SAP30
LOW QUALITY PROTEIN: histone deacetylase complex subunit SAP30.
    
   0.553
ING1
Inhibitor of growth protein.
    
 
 0.538
RBBP7
Histone-binding protein RBBP7 isoform X3.
    
 
 0.504
RBBP4
Histone-binding protein RBBP4 isoform X1.
    
 
 0.504
MIER2
Mesoderm induction early response protein 2 isoform X1.
    
 
 0.430
MIER1
Mesoderm induction early response protein 1 isoform X2.
    
 
 0.420
MIER3
Mesoderm induction early response protein 3.
    
 
 0.420
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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