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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRABD2BMetalloprotease TIKI2. (550 aa)    
Predicted Functional Partners:
SLC5A9
Sodium/glucose cotransporter 4; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      
 0.608
NUS1
Dehydrodolichyl diphosphate synthase complex subunit NUS1.
      
 0.513
UPK1B
Tetraspanin.
      
 0.482
SESTD1
SEC14 domain and spectrin repeat-containing protein 1.
      
 0.463
ICMT
Protein-S-isoprenylcysteine O-methyltransferase.
      
 0.440
SHISA3
Protein shisa-3 homolog.
      
 0.437
DKKL1
Dickkopf-like protein 1 isoform X1.
      
 0.431
TCTA
T-cell leukemia translocation-altered gene protein homolog; May be required for cellular fusion during osteoclastogenesis; Belongs to the TCTA family.
      
 0.420
SLITRK6
SLIT and NTRK-like protein 6.
      
 0.410
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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