Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KDM5BLysine-specific demethylase 5B. (1483 aa)    
Predicted Functional Partners:
ATP5F1C
ATP synthase subunit gamma.
  
 0.819
ATP5F1D
ATP synthase subunit delta, mitochondrial.
  
 0.819
PAX9
Paired box protein Pax-9.
    
 
 0.786
RB1
Retinoblastoma-associated protein.
    
 
 0.785
TFAP2C
Transcription factor AP-2 gamma.
    
 0.752
RBBP5
Retinoblastoma-binding protein 5.
    
 0.727
ATP5PO
ATP synthase subunit O, mitochondrial.
  
 0.722
ENSVVUP00000040510
annotation not available
  
 0.722
MYC
Myc proto-oncogene protein; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes.
   
 0.712
ENSVVUP00000002733
annotation not available
  
 0.692
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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