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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAMR1Inactive serine protease PAMR1; Belongs to the peptidase S1 family. (721 aa)    
Predicted Functional Partners:
CLPTM1L
Cleft lip and palate transmembrane protein 1-like protein.
    
 
 0.748
SMIM12
Small integral membrane protein 12.
    
 0.626
LRRC40
Leucine-rich repeat-containing protein 40.
    
 0.621
RNF151
LOW QUALITY PROTEIN: RING finger protein 151.
      
 0.607
NAIF1
Nuclear apoptosis-inducing factor 1.
    
 
 0.607
ENDOU
poly(U)-specific endoribonuclease.
      
 0.607
TCAIM
T-cell activation inhibitor, mitochondrial isoform X1.
      
 0.607
SH3D21
SH3 domain-containing protein 21 isoform X1.
      
 0.607
BEND7
BEN domain-containing protein 7 isoform X6.
      
 0.606
SHISA4
Protein shisa-4.
      
 0.606
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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