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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZDHHC3Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (364 aa)    
Predicted Functional Partners:
GABRE
Gamma-aminobutyric acid receptor subunit epsilon; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.733
SLC9A3R1
Na(+)/H(+) exchange regulatory cofactor NHE-RF; Scaffold protein that connects plasma membrane proteins with members of the ezrin/moesin/radixin family and thereby helps to link them to the actin cytoskeleton and to regulate their surface expression.
      
 0.694
ZDHHC13
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
0.620
ZDHHC8
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
 
0.599
ZDHHC5
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
 
0.575
PREP
Prolyl endopeptidase.
   
  
 0.558
ZDHHC4
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
0.510
NAA16
N-alpha-acetyltransferase 16, NatA auxiliary subunit isoform X1.
    
 
 0.504
ZDHHC17
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
0.497
WRN
Werner syndrome ATP-dependent helicase.
    
 0.478
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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