ZNF502 protein (Vulpes vulpes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ZNF502

Zinc finger protein 502. (541 aa)

Predicted Functional Partners:

N4BP2L2

0.489

ICE2

0.425

AFG1L

0.415

AK9

0.408

MED17

0.405

Your Current Organism:

Vulpes vulpes

NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFG1L	ICE2	ENSVVUP00000006194	ENSVVUP00000002370	AFG1-like ATPase.	Little elongation complex subunit 2 isoform X2.	0.508
AFG1L	N4BP2L2	ENSVVUP00000006194	ENSVVUP00000036985	AFG1-like ATPase.	NEDD4-binding protein 2-like 2 isoform X2.	0.414
AFG1L	ZNF502	ENSVVUP00000006194	ENSVVUP00000009704	AFG1-like ATPase.	Zinc finger protein 502.	0.415
AK9	ZNF502	ENSVVUP00000008428	ENSVVUP00000009704	Adenylate kinase 9 isoform X2.	Zinc finger protein 502.	0.408
ICE2	AFG1L	ENSVVUP00000002370	ENSVVUP00000006194	Little elongation complex subunit 2 isoform X2.	AFG1-like ATPase.	0.508
ICE2	MED17	ENSVVUP00000002370	ENSVVUP00000015622	Little elongation complex subunit 2 isoform X2.	Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.485
ICE2	N4BP2L2	ENSVVUP00000002370	ENSVVUP00000036985	Little elongation complex subunit 2 isoform X2.	NEDD4-binding protein 2-like 2 isoform X2.	0.548
ICE2	ZNF502	ENSVVUP00000002370	ENSVVUP00000009704	Little elongation complex subunit 2 isoform X2.	Zinc finger protein 502.	0.425
MED17	ICE2	ENSVVUP00000015622	ENSVVUP00000002370	Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Little elongation complex subunit 2 isoform X2.	0.485
MED17	N4BP2L2	ENSVVUP00000015622	ENSVVUP00000036985	Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	NEDD4-binding protein 2-like 2 isoform X2.	0.485
MED17	ZNF502	ENSVVUP00000015622	ENSVVUP00000009704	Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Zinc finger protein 502.	0.405
N4BP2L2	AFG1L	ENSVVUP00000036985	ENSVVUP00000006194	NEDD4-binding protein 2-like 2 isoform X2.	AFG1-like ATPase.	0.414
N4BP2L2	ICE2	ENSVVUP00000036985	ENSVVUP00000002370	NEDD4-binding protein 2-like 2 isoform X2.	Little elongation complex subunit 2 isoform X2.	0.548
N4BP2L2	MED17	ENSVVUP00000036985	ENSVVUP00000015622	NEDD4-binding protein 2-like 2 isoform X2.	Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.485
N4BP2L2	ZNF502	ENSVVUP00000036985	ENSVVUP00000009704	NEDD4-binding protein 2-like 2 isoform X2.	Zinc finger protein 502.	0.489
ZNF502	AFG1L	ENSVVUP00000009704	ENSVVUP00000006194	Zinc finger protein 502.	AFG1-like ATPase.	0.415
ZNF502	AK9	ENSVVUP00000009704	ENSVVUP00000008428	Zinc finger protein 502.	Adenylate kinase 9 isoform X2.	0.408
ZNF502	ICE2	ENSVVUP00000009704	ENSVVUP00000002370	Zinc finger protein 502.	Little elongation complex subunit 2 isoform X2.	0.425
ZNF502	MED17	ENSVVUP00000009704	ENSVVUP00000015622	Zinc finger protein 502.	Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.405
ZNF502	N4BP2L2	ENSVVUP00000009704	ENSVVUP00000036985	Zinc finger protein 502.	NEDD4-binding protein 2-like 2 isoform X2.	0.489