Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPS1440S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (160 aa)    
Predicted Functional Partners:
RPL19
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
  
 
 0.999
RPS5
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
  
 0.999
RPS8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.999
RPS9
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
  
 0.999
RPS12
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
  
 0.999
RPS18
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
 0.999
LOC112913585
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
  
 
 0.998
RPLP2
60S acidic ribosomal protein P2; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 
 0.998
RPL5
60S ribosomal protein L5.
  
 
 0.998
RPL3
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 
 0.997
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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