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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCOF1Treacle protein isoform X2. (1579 aa)    
Predicted Functional Partners:
PAX3
Paired box protein Pax-3 isoform X1.
    
 
 0.565
BAZ1B
Tyrosine-protein kinase BAZ1B.
   
 
 0.545
NES
Nestin; Belongs to the intermediate filament family.
  
 
  0.519
LOC112932169
Neuroendocrine secretory protein 55.
   
 0.495
NOP56
Nucleolar protein 56.
   
 
 0.483
PNISR
Arginine/serine-rich protein PNISR isoform X2.
    
 
 0.479
IFNAR2
Interferon alpha/beta receptor 2 isoform X1.
  
  0.471
WWC2
Protein WWC2 isoform X4.
    
 
 0.445
CENPC
Centromere protein C isoform X1.
  
 
 0.441
WDR75
WD repeat-containing protein 75.
      
 0.441
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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