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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM33Transmembrane protein 33. (246 aa)    
Predicted Functional Partners:
TMEM43
Transmembrane protein 43.
      
 0.765
TMED1
Transmembrane emp24 domain-containing protein 1 isoform X3.
   
  
 0.763
CFAP299
Uncharacterized protein C4orf22 homolog isoform X2.
      
 0.731
SLC30A9
Zinc transporter 9.
   
  
 0.723
FAM8A1
Protein FAM8A1.
      
 0.697
RTN1
Reticulon.
   
 
 0.614
ATP8A1
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
 
 0.611
SHISA3
Protein shisa-3 homolog.
      
 0.607
HSD17B12
Very-long-chain 3-oxoacyl-CoA reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.598
RNF26
E3 ubiquitin-protein ligase RNF26.
    
 
 0.589
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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