LOC112919020 protein (Vulpes vulpes) - STRING interaction network

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Score

LOC112919020

LOW QUALITY PROTEIN: U11/U12 small nuclear ribonucleoprotein 35 kDa protein-like. (234 aa)

Predicted Functional Partners:

SNRNP48

0.949

SNRNP25

0.915

PDCD7

0.905

LSM10

0.892

SNRPD3

0.885

SNRPD1

0.876

U2AF2

0.825

NCBP2

0.824

SNRPD2

0.812

ENSVVUP00000022877

0.812

Your Current Organism:

Vulpes vulpes

NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSVVUP00000022877	LOC112919020	ENSVVUP00000022877	ENSVVUP00000010400	annotation not available	LOW QUALITY PROTEIN: U11/U12 small nuclear ribonucleoprotein 35 kDa protein-like.	0.812
ENSVVUP00000022877	LSM10	ENSVVUP00000022877	ENSVVUP00000031960	annotation not available	U7 snRNA-associated Sm-like protein LSm10.	0.934
ENSVVUP00000022877	NCBP2	ENSVVUP00000022877	ENSVVUP00000011667	annotation not available	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.794
ENSVVUP00000022877	SNRNP25	ENSVVUP00000022877	ENSVVUP00000018553	annotation not available	U11/U12 small nuclear ribonucleoprotein 25 kDa protein.	0.459
ENSVVUP00000022877	SNRNP48	ENSVVUP00000022877	ENSVVUP00000006445	annotation not available	U11/U12 small nuclear ribonucleoprotein 48 kDa protein.	0.723
ENSVVUP00000022877	SNRPD1	ENSVVUP00000022877	ENSVVUP00000005104	annotation not available	Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA.	0.992
ENSVVUP00000022877	SNRPD3	ENSVVUP00000022877	ENSVVUP00000026351	annotation not available	Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing.	0.995
ENSVVUP00000022877	U2AF2	ENSVVUP00000022877	ENSVVUP00000009334	annotation not available	Splicing factor U2AF 65 kDa subunit isoform X2.	0.910
LOC112919020	ENSVVUP00000022877	ENSVVUP00000010400	ENSVVUP00000022877	LOW QUALITY PROTEIN: U11/U12 small nuclear ribonucleoprotein 35 kDa protein-like.	annotation not available	0.812
LOC112919020	LSM10	ENSVVUP00000010400	ENSVVUP00000031960	LOW QUALITY PROTEIN: U11/U12 small nuclear ribonucleoprotein 35 kDa protein-like.	U7 snRNA-associated Sm-like protein LSm10.	0.892
LOC112919020	NCBP2	ENSVVUP00000010400	ENSVVUP00000011667	LOW QUALITY PROTEIN: U11/U12 small nuclear ribonucleoprotein 35 kDa protein-like.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.824
LOC112919020	PDCD7	ENSVVUP00000010400	ENSVVUP00000018825	LOW QUALITY PROTEIN: U11/U12 small nuclear ribonucleoprotein 35 kDa protein-like.	LOW QUALITY PROTEIN: programmed cell death protein 7.	0.905
LOC112919020	SNRNP25	ENSVVUP00000010400	ENSVVUP00000018553	LOW QUALITY PROTEIN: U11/U12 small nuclear ribonucleoprotein 35 kDa protein-like.	U11/U12 small nuclear ribonucleoprotein 25 kDa protein.	0.915
LOC112919020	SNRNP48	ENSVVUP00000010400	ENSVVUP00000006445	LOW QUALITY PROTEIN: U11/U12 small nuclear ribonucleoprotein 35 kDa protein-like.	U11/U12 small nuclear ribonucleoprotein 48 kDa protein.	0.949
LOC112919020	SNRPD1	ENSVVUP00000010400	ENSVVUP00000005104	LOW QUALITY PROTEIN: U11/U12 small nuclear ribonucleoprotein 35 kDa protein-like.	Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA.	0.876
LOC112919020	SNRPD2	ENSVVUP00000010400	ENSVVUP00000004049	LOW QUALITY PROTEIN: U11/U12 small nuclear ribonucleoprotein 35 kDa protein-like.	Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome.	0.812
LOC112919020	SNRPD3	ENSVVUP00000010400	ENSVVUP00000026351	LOW QUALITY PROTEIN: U11/U12 small nuclear ribonucleoprotein 35 kDa protein-like.	Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing.	0.885
LOC112919020	U2AF2	ENSVVUP00000010400	ENSVVUP00000009334	LOW QUALITY PROTEIN: U11/U12 small nuclear ribonucleoprotein 35 kDa protein-like.	Splicing factor U2AF 65 kDa subunit isoform X2.	0.825
LSM10	ENSVVUP00000022877	ENSVVUP00000031960	ENSVVUP00000022877	U7 snRNA-associated Sm-like protein LSm10.	annotation not available	0.934
LSM10	LOC112919020	ENSVVUP00000031960	ENSVVUP00000010400	U7 snRNA-associated Sm-like protein LSm10.	LOW QUALITY PROTEIN: U11/U12 small nuclear ribonucleoprotein 35 kDa protein-like.	0.892