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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTMR6Myotubularin-related protein 6. (667 aa)    
Predicted Functional Partners:
MTMR9
Myotubularin-related protein 9.
  
0.922
LOC112931664
LOW QUALITY PROTEIN: myotubularin-related protein 9-like.
   
 0.920
LRGUK
Leucine-rich repeat and guanylate kinase domain-containing protein.
   
 
 0.545
CBLN3
Cerebellin-3.
    
 0.528
BEAN1
Protein BEAN1 isoform X1.
      
 0.518
MRPL35
39S ribosomal protein L35, mitochondrial.
      
 0.504
SRGAP3
SLIT-ROBO Rho GTPase-activating protein 3 isoform X2.
      
 0.497
CCNDBP1
cyclin-D1-binding protein 1.
      
 0.456
SEC23B
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
      
 0.451
LHFPL3
LHFPL tetraspan subfamily member 3 protein isoform X1.
      
 0.440
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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