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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM53Transmembrane protein 53 isoform X2. (361 aa)    
Predicted Functional Partners:
ACBD6
acyl-CoA-binding domain-containing protein 6.
      
 0.786
ASPHD2
Aspartate beta-hydroxylase domain-containing protein 2.
      
 0.786
B3GLCT
Beta-1,3-glucosyltransferase.
      
 0.780
TMEM223
Transmembrane protein 223.
      
 0.769
EPPK1
Epiplakin.
      
 0.624
TMEM38A
Trimeric intracellular cation channel type A.
   
  
 0.613
TMEM154
Transmembrane protein 154.
      
 0.607
TMEM147
Transmembrane protein 147 isoform X2.
      
 0.605
ENSVVUP00000023342
annotation not available
      
 0.605
DNAJC3
dnaJ homolog subfamily C member 3.
      
 0.604
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.