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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM19Probable RNA-binding protein 19. (968 aa)    
Predicted Functional Partners:
BMS1
Ribosome biogenesis protein BMS1 homolog isoform X1.
   
 
 0.990
IMP4
U3 small nucleolar ribonucleoprotein protein IMP4.
   
   0.980
LOC112909567
Periodic tryptophan protein 2 homolog.
   
 
 0.909
SURF6
Surfeit locus protein 6.
   
 
 0.902
BYSL
Bystin.
   
 
 0.901
WDR36
WD repeat-containing protein 36.
   
 
 0.891
WDR12
Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  
 0.887
AATF
Protein AATF isoform X1.
   
 
 0.883
NOP9
Nucleolar protein 9.
   
 
 0.877
WDR46
WD repeat-containing protein 46.
   
   0.871
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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