Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MTTPMicrosomal triglyceride transfer protein large subunit. (932 aa)    
Predicted Functional Partners:
APOB
Apolipoprotein B-100.
   
 0.995
P4HB
Protein disulfide-isomerase.
    
 0.984
PDIA2
Protein disulfide-isomerase A2.
    
 0.906
APOE
Apolipoprotein E.
      
 0.738
PDIA4
Protein disulfide-isomerase A4.
    
 0.688
PDIA3
Protein disulfide-isomerase.
    
 0.685
PRKDC
DNA-dependent protein kinase catalytic subunit isoform X2; Belongs to the PI3/PI4-kinase family.
    
 
 0.629
SAR1B
GTP-binding protein SAR1b; Belongs to the small GTPase superfamily. SAR1 family.
      
 0.574
LPGAT1
acyl-CoA:lysophosphatidylglycerol acyltransferase 1 isoform X1.
      
 0.551
FABP1
Fatty acid-binding protein, liver.
   
  
 0.551
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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