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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERI3ERI1 exoribonuclease 3 isoform X1. (462 aa)    
Predicted Functional Partners:
TRAPPC1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
  
 0.782
CCDC24
Coiled-coil domain-containing protein 24 isoform X1.
      
 0.750
TRAPPC4
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
      
 0.746
LANCL1
lanC-like protein 1.
      
 0.732
PRNP
Major prion protein; Belongs to the prion family.
    
 
 0.726
SRCIN1
LOW QUALITY PROTEIN: SRC kinase signaling inhibitor 1.
      
 0.639
ENSVVUP00000002515
annotation not available
      
 0.607
DPP6
Dipeptidyl aminopeptidase-like protein 6; Belongs to the peptidase S9B family.
      
 0.607
RNF220
E3 ubiquitin-protein ligase RNF220 isoform X1.
      
 0.607
ENSVVUP00000010695
annotation not available
      
 0.607
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.