Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ERI3ERI1 exoribonuclease 3 isoform X1. (462 aa)    
Predicted Functional Partners:
TRAPPC1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
  
 0.774
TRAPPC4
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
  
 0.773
PRNP
Major prion protein; Belongs to the prion family.
    
 
 0.725
CCDC24
Coiled-coil domain-containing protein 24 isoform X1.
      
 0.706
DAD1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...]
      
 0.659
GAPVD1
GTPase-activating protein and VPS9 domain-containing protein 1 isoform X3.
      
 0.574
ENSVVUP00000002515
annotation not available
      
 0.573
LANCL1
lanC-like protein 1.
      
 0.573
SPCS2
Signal peptidase complex subunit 2.
      
 0.573
SRCIN1
LOW QUALITY PROTEIN: SRC kinase signaling inhibitor 1.
      
 0.549
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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