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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBIP1BBSome-interacting protein 1. (70 aa)    
Predicted Functional Partners:
BBS1
Bardet-Biedl syndrome 1 protein isoform X1.
    
 0.992
TTC8
Tetratricopeptide repeat protein 8 isoform X1.
    
 0.989
ENSVVUP00000019188
annotation not available
    
 
 0.975
BBS4
Bardet-Biedl syndrome 4 protein isoform X1.
    
 
 0.975
BBS7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
    
 0.938
BBS9
Protein PTHB1 isoform X1.
    
 0.938
BBS2
Bardet-Biedl syndrome 2 protein homolog.
    
 0.925
BBS5
Kelch-like protein 41.
   
 0.775
KIFC2
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.591
ENSVVUP00000029608
annotation not available
    
 
 0.591
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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