STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATC1Spermatogenesis and centriole associated 1. (434 aa)    
Predicted Functional Partners:
SPATA45
Spermatogenesis-associated protein 45.
      
 0.607
SPATA9
Spermatogenesis-associated protein 9.
      
 0.607
TEX43
Testis-expressed protein 43.
      
 0.607
TEKT4
Tektin-4.
      
 0.561
TBCCD1
TBCC domain-containing protein 1.
      
 0.550
SPEM1
Spermatid maturation protein 1.
      
 0.543
RNF17
RING finger protein 17 isoform X2.
      
 0.527
CBY2
Spermatid-associated protein isoform X1.
      
 0.523
TEX35
Testis-expressed protein 35.
      
 0.517
ENSVVUP00000017264
annotation not available
      
 0.517
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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