STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCN15Lipocalin 15; Belongs to the calycin superfamily. Lipocalin family. (143 aa)    
Predicted Functional Partners:
PCLO
Piccolo presynaptic cytomatrix protein.
    
 
 0.660
ENSUAMP00000009373
Ig-like domain-containing protein.
      
 0.628
TM4SF20
Transmembrane 4 L six family member 20.
      
 0.557
EPS8L3
EPS8 like 3.
      
 0.556
CDC73
Cell division cycle 73.
   
 0.540
RBP2
Retinol binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
   
  
 0.525
ENSUAMP00000001520
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
   
 
 0.519
EDA2R
Ectodysplasin A2 receptor.
      
 0.514
BPIFB4
BPI fold containing family B member 4.
   
  
 0.506
ENSUAMP00000029394
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
   
 
0.497
Your Current Organism:
Ursus americanus
NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.