STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSUAMP00000002585IF rod domain-containing protein; Belongs to the intermediate filament family. (961 aa)    
Predicted Functional Partners:
ENSUAMP00000028107
IF rod domain-containing protein; Belongs to the intermediate filament family.
 
      0.867
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.746
VCL
Vinculin.
     
 0.582
MANSC1
MANSC domain containing 1.
  
  0.537
ZYX
Zyxin.
     
 0.530
SYNC
Syncoilin, intermediate filament protein; Belongs to the intermediate filament family.
   
 0.516
NES
Nestin; Belongs to the intermediate filament family.
  
 
 0.514
TAPBP
TAP binding protein.
  
 
  0.484
ENSUAMP00000024402
AB hydrolase-1 domain-containing protein.
   
  
 0.476
DSP
Desmoplakin.
    
 0.470
Your Current Organism:
Ursus americanus
NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.